Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase family protein | A33Q_1054 | Not Available | Negative | 1058339 - 1058752 | 15717.9 |
| transcriptional regulator, arac family | A33Q_1055 | Not Available | Positive | 1059101 - 1060075 | 36665.5 |
| hypothetical protein | A33Q_1056 | Not Available | Positive | 1060228 - 1061052 | 31607.0 |
| phnb protein | A33Q_1057 | Not Available | Positive | 1061064 - 1061501 | 16485.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | A33Q_1058 | Not Available | Negative | 1061669 - 1062178 | 18872.1 |
| nitrate/nitrite transporter | A33Q_1059 | Not Available | Positive | 1062452 - 1063807 | 49169.9 |
| assimilatory nitrate reductase large subunit | A33Q_1060 | Not Available | Positive | 1063833 - 1067333 | 128832.0 |
| rubredoxin | A33Q_1061 | Not Available | Positive | 1067385 - 1068842 | 55666.9 |
| hypothetical protein | A33Q_1062 | Not Available | Negative | 1068847 - 1069443 | 23382.2 |
| uroporphyrinogen-iii methyltransferase | A33Q_1063 | Not Available | Negative | 1069482 - 1070258 | 27927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
