Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase pria essential for oric/dnaa-independent dna replication | A33Q_1024 | Not Available | Positive | 1033809 - 1036328 | 95734.8 |
| atp phosphoribosyltransferase | A33Q_1025 | Not Available | Positive | 1036618 - 1037478 | 31302.8 |
| histidinol dehydrogenase | A33Q_1026 | Not Available | Positive | 1037555 - 1038844 | 46524.5 |
| histidinol-phosphate aminotransferase | A33Q_1027 | Not Available | Positive | 1038846 - 1039907 | 40002.4 |
| histidinol-phosphatase | A33Q_1028 | Not Available | Positive | 1039917 - 1041011 | 41265.5 |
| thioredoxin family protein | A33Q_1029 | Not Available | Negative | 1041085 - 1042497 | 54267.1 |
| chromosome partition protein smc | A33Q_1030 | Not Available | Negative | 1042601 - 1046089 | 133676.0 |
| hypothetical protein | A33Q_1031 | Not Available | Positive | 1046106 - 1046291 | 6927.48 |
| hypothetical protein | A33Q_1032 | Not Available | Positive | 1046371 - 1046910 | 20658.5 |
| hypothetical protein | A33Q_1033 | Not Available | Negative | 1046953 - 1047129 | 6633.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
