Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0994 | Not Available | Negative | 1001333 - 1001872 | 20852.8 |
| hypothetical protein | A33Q_0995 | Not Available | Positive | 1002132 - 1004291 | 83048.6 |
| lipid a export atp-binding/permease protein msba | A33Q_0996 | Not Available | Positive | 1004397 - 1006148 | 64274.7 |
| hypothetical protein | A33Q_0997 | Not Available | Negative | 1006176 - 1007261 | 38727.7 |
| hypothetical protein | A33Q_0998 | Not Available | Negative | 1007284 - 1007709 | 16050.7 |
| tpr repeat protein | A33Q_0999 | Not Available | Positive | 1007871 - 1008629 | 29006.6 |
| hypothetical protein | A33Q_1000 | Not Available | Negative | 1008940 - 1009122 | 6963.49 |
| hypothetical protein | A33Q_1001 | Not Available | Negative | 1009115 - 1009855 | 28929.6 |
| dolichol-phosphate mannosyltransferase | A33Q_1002 | Not Available | Positive | 1009935 - 1010687 | 28641.2 |
| abc transporter, permease protein | A33Q_1003 | Not Available | Negative | 1010665 - 1011903 | 47080.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
