Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | A33Q_0984 | Not Available | Negative | 991153 - 991536 | 13902.9 |
| large-conductance mechanosensitive channel | A33Q_0985 | Not Available | Positive | 991776 - 992195 | 15096.8 |
| hypothetical protein | A33Q_0986 | Not Available | Negative | 992250 - 992702 | 17759.3 |
| hypothetical protein | A33Q_0987 | Not Available | Negative | 992715 - 993095 | 14971.6 |
| rna polymerase ecf-type sigma factor | A33Q_0988 | Not Available | Negative | 993217 - 993765 | 21495.8 |
| uspa | A33Q_0989 | Not Available | Negative | 993910 - 994833 | 34414.0 |
| hypothetical protein | A33Q_0990 | Not Available | Negative | 995381 - 996859 | 55906.7 |
| methyltransferase fkbm | A33Q_0991 | Not Available | Negative | 996896 - 997750 | 32062.1 |
| galactosyltransferase or lps biosynthesis rfbu related protein | A33Q_0992 | Not Available | Negative | 997751 - 998797 | 40177.3 |
| hypothetical protein | A33Q_0993 | Not Available | Negative | 998801 - 1001227 | 90876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
