Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated recb family exonuclease cas4a | A33Q_0088 | Not Available | Positive | 98982 - 99383 | 15835.9 |
| hypothetical protein | A33Q_0089 | Not Available | Positive | 99620 - 99817 | 7542.21 |
| crispr-associated protein cas1 | A33Q_0090 | Not Available | Positive | 99914 - 100882 | 37508.4 |
| hypothetical protein | A33Q_0091 | Not Available | Negative | 100866 - 101027 | 6052.59 |
| hypothetical protein | A33Q_0092 | Not Available | Positive | 101100 - 101360 | 9819.71 |
| crispr-associated protein cas2 | A33Q_0093 | Not Available | Positive | 101485 - 101700 | 8603.56 |
| hypothetical protein | A33Q_0094 | Not Available | Negative | 101951 - 102085 | 5067.87 |
| hypothetical protein | A33Q_0095 | Not Available | Negative | 102423 - 102650 | 8881.89 |
| hypothetical protein | A33Q_0096 | Not Available | Negative | 102764 - 102889 | 4551.43 |
| Trna-ala | Not Available | Not Available | Positive | 103033 - 103106 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
