Planococcus antarcticus DSM 14505

sphere

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Planococcus

Description

Planococcus antarcticus DSM 14505 is a Gram-positive, spherical bacterium characterized by its psychrotolerant nature, thriving optimally at a temperature of 16°C. This organism is notable for its ability to withstand lower temperatures, which aligns with its isolation from cold environments, such as Antarctica. The bacterium possesses flagella, indicating its potential for motility, which may contribute to its adaptability in its native habitat. Unlike some bacterial species, Planococcus antarcticus is non-spore-forming, suggesting that it relies on other mechanisms for survival in fluctuating environmental conditions. The genome of Planococcus antarcticus DSM 14505 contains three replicons, which could be indicative of its genetic diversity and adaptability, allowing the organism to respond to various environmental stresses. The specific accessions associated with this strain are NZ_CP016535.2, NZ_CP016534.2, and NZ_CP016536.1, which provide a basis for further genomic studies and insights into its metabolic capabilities. In summary, Planococcus antarcticus DSM 14505 exemplifies microbial life that has adapted to extreme cold environments, showcasing unique traits such as psychrotolerance and motility. Understanding such organisms contributes to our knowledge of microbial ecology in polar regions and their potential roles in biogeochemical cycles amidst changing climate conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusPlanococcus
SpeciesPlanococcus antarcticus
StrainDSM 14505

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Planococcus antarcticus DSM 14505
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planococcus antarcticus DSM 14505 chromosome, complete genome.

Gene Summary

Adenine Count

1070122 bp

Thymine Count

1067226 bp

Guanine Count

818449 bp

Cytosine Count

809748 bp

Genome Length

3765545 bp

Protein-coding Genes

3630 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rida family proteinBBH88_RS00255Not AvailablePositive56443 - 5682013319.9
septation regulator spovgBBH88_RS00260Not AvailablePositive57347 - 5763110513.4
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuBBH88_RS00265Not AvailablePositive57878 - 5925148692.8
ribose-phosphate diphosphokinaseBBH88_RS00270Not AvailablePositive59267 - 6022935009.4
50s ribosomal protein l25/general stress protein ctcBBH88_RS00275Not AvailablePositive60343 - 6099323552.4
aminoacyl-trna hydrolaseBBH88_RS00280Not AvailablePositive61098 - 6166120949.5
transcription-repair coupling factorBBH88_RS00285Not AvailablePositive61731 - 65264133784.0
polysaccharide biosynthesis proteinBBH88_RS00290Not AvailablePositive65810 - 6741758201.3
nucleoside triphosphate pyrophosphohydrolaseBBH88_RS00295Not AvailablePositive67414 - 6887754894.5
rna-binding s4 domain-containing proteinBBH88_RS00300Not AvailablePositive68880 - 6917011088.6

Displaying genes 51 – 60 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

16 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004131(2E)-hexadecenoyl-CoAC37H60N7O17P3SChemical structure of (2E)-hexadecenoyl-CoA4460-95-1
Average999.895Da
Monoisotopic999.297923755Da
BASm0004220(2E)-hexenoyl-CoAC27H40N7O17P3SChemical structure of (2E)-hexenoyl-CoANot available
Average859.629Da
Monoisotopic859.1414231Da
BASm0004330(3S)-hydroxyhexadecanoyl-CoAC37H66N7O18P3SChemical structure of (3S)-hydroxyhexadecanoyl-CoA35106-50-4
Average1021.942Da
Monoisotopic1021.339789Da

Displaying 1–10 of 16 metabolites

Health Effects

No health effects information available for this bacterium.