Planococcus antarcticus DSM 14505

sphere

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Planococcus

Description

Planococcus antarcticus DSM 14505 is a Gram-positive, spherical bacterium characterized by its psychrotolerant nature, thriving optimally at a temperature of 16°C. This organism is notable for its ability to withstand lower temperatures, which aligns with its isolation from cold environments, such as Antarctica. The bacterium possesses flagella, indicating its potential for motility, which may contribute to its adaptability in its native habitat. Unlike some bacterial species, Planococcus antarcticus is non-spore-forming, suggesting that it relies on other mechanisms for survival in fluctuating environmental conditions. The genome of Planococcus antarcticus DSM 14505 contains three replicons, which could be indicative of its genetic diversity and adaptability, allowing the organism to respond to various environmental stresses. The specific accessions associated with this strain are NZ_CP016535.2, NZ_CP016534.2, and NZ_CP016536.1, which provide a basis for further genomic studies and insights into its metabolic capabilities. In summary, Planococcus antarcticus DSM 14505 exemplifies microbial life that has adapted to extreme cold environments, showcasing unique traits such as psychrotolerance and motility. Understanding such organisms contributes to our knowledge of microbial ecology in polar regions and their potential roles in biogeochemical cycles amidst changing climate conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusPlanococcus
SpeciesPlanococcus antarcticus
StrainDSM 14505

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Planococcus antarcticus DSM 14505
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planococcus antarcticus DSM 14505 chromosome, complete genome.

Gene Summary

Adenine Count

1070122 bp

Thymine Count

1067226 bp

Guanine Count

818449 bp

Cytosine Count

809748 bp

Genome Length

3765545 bp

Protein-coding Genes

3630 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ypoc family proteinBBH88_RS11065Not AvailableNegative2206586 - 220692413108.9
endonuclease iiiBBH88_RS11070Not AvailableNegative2206899 - 220757925887.6
dnad domain-containing proteinBBH88_RS11075Not AvailableNegative2207592 - 220829327613.2
asparagine--trna ligaseBBH88_RS11080Not AvailableNegative2208322 - 220961749086.4
pyridoxal phosphate-dependent aminotransferaseBBH88_RS11085Not AvailableNegative2209649 - 221083943263.5
duf5590 domain-containing proteinBBH88_RS11090Not AvailableNegative2210855 - 221133117792.2
ypma family proteinBBH88_RS11095Not AvailableNegative2211340 - 22115106501.9
atp-dependent dna helicase dingBBH88_RS11100Not AvailableNegative2211535 - 2214297105080.0
aspartate 1-decarboxylaseBBH88_RS11105Not AvailableNegative2214442 - 221482514060.0
pantoate--beta-alanine ligaseBBH88_RS11110Not AvailableNegative2214829 - 221566531173.3

Displaying genes 2251 – 2260 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

16 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004131(2E)-hexadecenoyl-CoAC37H60N7O17P3SChemical structure of (2E)-hexadecenoyl-CoA4460-95-1
Average999.895Da
Monoisotopic999.297923755Da
BASm0004220(2E)-hexenoyl-CoAC27H40N7O17P3SChemical structure of (2E)-hexenoyl-CoANot available
Average859.629Da
Monoisotopic859.1414231Da
BASm0004330(3S)-hydroxyhexadecanoyl-CoAC37H66N7O18P3SChemical structure of (3S)-hydroxyhexadecanoyl-CoA35106-50-4
Average1021.942Da
Monoisotopic1021.339789Da

Displaying 1–10 of 16 metabolites

Health Effects

No health effects information available for this bacterium.