Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp) (oxalosuccinate decarboxylase) (idh) (nadp(+)-specific icdh) (idp) | AGR3A_Cc180013 | Not Available | Negative | 724817 - 726031 | 45079.1 |
| conserved exported hypothetical protein | AGR3A_Cc180014 | Not Available | Positive | 726247 - 726777 | 19327.5 |
| rna methyltransferase | AGR3A_Cc180015 | Not Available | Positive | 727052 - 727897 | 31083.8 |
| glutamate racemase | AGR3A_Cc180016 | Not Available | Positive | 727881 - 728702 | 29981.1 |
| hypothetical protein | AGR3A_Cc180017 | Not Available | Negative | 728923 - 729123 | 7169.58 |
| hypothetical protein | AGR3A_Cc180018 | Not Available | Positive | 729096 - 729335 | 9050.15 |
| transcriptional regulator, xre family protein | AGR3A_Cc180019 | Not Available | Positive | 729629 - 729763 | 4968.0 |
| putative homoserine/homoserine lactone efflux protein | AGR3A_Cc180020 | Not Available | Positive | 729838 - 730476 | 22378.0 |
| putative amino-acid metabolite efflux pump | AGR3A_Cc180021 | Not Available | Positive | 730514 - 731401 | 31294.8 |
| conserved hypothetical protein | AGR3A_Cc180022 | Not Available | Positive | 731528 - 733045 | 55030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

