Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, membrane spanning protein (amino acid) | AGR3A_Cc180003 | Not Available | Negative | 711773 - 712603 | 31119.7 |
| abc transporter, membrane spanning protein (amino acid) | AGR3A_Cc180004 | Not Available | Negative | 712600 - 713403 | 28507.4 |
| abc transporter, substrate binding protein (amino acid) | AGR3A_Cc180005 | Not Available | Negative | 713516 - 714289 | 27613.9 |
| ompa family protein | AGR3A_Cc180006 | Not Available | Positive | 714630 - 716894 | 83529.6 |
| pseudouridine-5'-phosphate glycosidase 1 | AGR3A_Cc180007 | Not Available | Negative | 717074 - 717997 | 32530.1 |
| carbohydrate kinase | AGR3A_Cc180008 | Not Available | Negative | 718027 - 718968 | 32513.2 |
| recombinase a (reca) | AGR3A_Cc180009 | Not Available | Positive | 719215 - 720306 | 38776.5 |
| alanyl-trna synthetase | AGR3A_Cc180010 | Not Available | Positive | 720544 - 723207 | 95665.4 |
| conserved hypothetical protein | AGR3A_Cc180011 | Not Available | Positive | 723324 - 723707 | 14788.4 |
| glutathione s-transferase | AGR3A_Cc180012 | Not Available | Negative | 723781 - 724407 | 22958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

