Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AGR3A_Cc170118 | Not Available | Positive | 578798 - 579925 | 42048.0 |
| transcriptional regulator | AGR3A_Cc170119 | Not Available | Negative | 580004 - 580699 | 25596.9 |
| pyridoxine 5'-phosphate synthase | AGR3A_Cc170120 | Not Available | Positive | 580933 - 581688 | 27239.5 |
| nadh dehydrogenase | AGR3A_Cc170121 | Not Available | Positive | 581760 - 583025 | 45976.5 |
| nadp-dependent alcohol dehydrogenase c 2 | AGR3A_Cc170122 | Not Available | Negative | 583253 - 584299 | 37359.8 |
| arac family transcriptional regulator | AGR3A_Cc170123 | Not Available | Positive | 584489 - 585397 | 33188.9 |
| tetr family transcriptional regulator | AGR3A_Cc170124 | Not Available | Positive | 585806 - 586459 | 23780.4 |
| ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase) | AGR3A_Cc170125 | Not Available | Positive | 586509 - 587528 | 36619.1 |
| antitoxin of the yoeb-yefm toxin-antitoxin system | AGR3A_Cc170126 | Not Available | Positive | 587666 - 587920 | 9677.36 |
| toxin of the yoeb-yefm toxin-antitoxin system | AGR3A_Cc170127 | Not Available | Positive | 587917 - 588186 | 10559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

