Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AGR3A_Cc170019 | Not Available | Negative | 485051 - 486301 | 47103.3 |
| lytic murein transglycosylase | AGR3A_Cc170020 | Not Available | Negative | 486608 - 487693 | 36841.9 |
| conserved hypothetical protein | AGR3A_Cc170021 | Not Available | Negative | 487819 - 488454 | 22297.5 |
| pyrophosphate--fructose 6-phosphate 1-phosphotransferase | AGR3A_Cc170022 | Not Available | Negative | 488506 - 489717 | 43243.5 |
| hypothetical protein | AGR3A_Cc170023 | Not Available | Negative | 489717 - 489962 | 9546.49 |
| dnaj family molecular chaperone | AGR3A_Cc170024 | Not Available | Positive | 490037 - 490789 | 27797.3 |
| putative 1:n-acetylmuramoyl-l-alanine amidase (family 2) with peptidoglycan binding domain | AGR3A_Cc170025 | Not Available | Positive | 490786 - 491565 | 28355.5 |
| soluble lytic transglycosylase | AGR3A_Cc170026 | Not Available | Positive | 491852 - 492352 | 18087.9 |
| sarcosine oxidase | AGR3A_Cc170027 | Not Available | Positive | 492505 - 493692 | 41792.7 |
| sarcosine oxidase | AGR3A_Cc170028 | Not Available | Positive | 493752 - 494942 | 42176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

