Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulatory protein, lysr family | AGR3A_Cc160046 | Not Available | Negative | 407831 - 408733 | 33987.8 |
| thioredoxin reductase, fad/nad(p)-binding | AGR3A_Cc160047 | Not Available | Negative | 408752 - 409726 | 34694.7 |
| putative transcriptional regulatory protein asnc/lrp family | AGR3A_Cc160048 | Not Available | Positive | 409976 - 410443 | 17364.2 |
| lipopolysaccharide core biosynthesis mannosyltransferase lpcc | AGR3A_Cc160049 | Not Available | Negative | 410475 - 411530 | 38620.8 |
| transcription elongation factor grea (transcript cleavage factor grea) | AGR3A_Cc160050 | Not Available | Negative | 411618 - 412094 | 17294.3 |
| hypothetical protein, putative elongator protein 3/miab/nifb | AGR3A_Cc160051 | Not Available | Positive | 412317 - 413549 | 45753.1 |
| putative uracil-dna glycosylase | AGR3A_Cc160052 | Not Available | Positive | 413549 - 415000 | 54731.8 |
| diguanylate cyclase | AGR3A_Cc160053 | Not Available | Positive | 415149 - 416288 | 40454.2 |
| conserved hypothetical protein | AGR3A_Cc160054 | Not Available | Negative | 416285 - 416473 | 6722.11 |
| carbamoyl phosphate synthase, large subunit | AGR3A_Cc160055 | Not Available | Negative | 416761 - 420249 | 125795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

