Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef family protein | AGR3A_Cc160006 | Not Available | Negative | 368820 - 371207 | 88231.9 |
| 50s ribosomal protein l25 | AGR3A_Cc160007 | Not Available | Negative | 371445 - 372053 | 22131.5 |
| putative diguanylate cyclase signaling protein (with ggdef, eal and mhyt domains) | AGR3A_Cc160008 | Not Available | Positive | 372359 - 374443 | 75364.1 |
| putative transcriptional regulatory protein, fis family | AGR3A_Cc160009 | Not Available | Positive | 374496 - 375509 | 37131.1 |
| aldehyde dehydrogenase | AGR3A_Cc160010 | Not Available | Positive | 375663 - 377180 | 55619.5 |
| methyl-accepting chemotaxis protein | AGR3A_Cc160011 | Not Available | Negative | 377313 - 379577 | 79666.5 |
| putative glycosyl transferase, family 2 | AGR3A_Cc160012 | Not Available | Positive | 379852 - 380604 | 27437.8 |
| lipid a biosynthesis protein | AGR3A_Cc160013 | Not Available | Positive | 380601 - 380912 | 12169.0 |
| conserved membrane hypothetical protein | AGR3A_Cc160014 | Not Available | Positive | 380887 - 382398 | 53804.7 |
| hypothetical protein | AGR3A_Cc160015 | Not Available | Positive | 382388 - 383236 | 31162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

