Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase | AGR3A_Cc140008 | Not Available | Negative | 280314 - 281783 | 53270.5 |
| d-beta-hydroxybutyrate dehydrogenase (bdh) (3-hydroxybutyrate dehydrogenase) (3-hbdh) | AGR3A_Cc140009 | Not Available | Negative | 281920 - 282696 | 27465.1 |
| putative oxidoreductase, llm family | AGR3A_Cc140010 | Not Available | Positive | 282930 - 283991 | 38648.3 |
| methionine aminopeptidase | AGR3A_Cc140011 | Not Available | Positive | 284046 - 284798 | 27169.3 |
| mfs permease | AGR3A_Cc150001 | Not Available | Positive | 285214 - 286404 | 40902.8 |
| transporter involved in cell envelope modification | AGR3A_Cc150002 | Not Available | Positive | 286587 - 287864 | 48879.6 |
| conserved exported hypothetical protein | AGR3A_Cc150003 | Not Available | Negative | 287920 - 288903 | 36890.5 |
| putative nitrate reductase protein | AGR3A_Cc150004 | Not Available | Positive | 289055 - 289639 | 21463.4 |
| conserved hypothetical protein | AGR3A_Cc150005 | Not Available | Positive | 289693 - 290466 | 27344.2 |
| gtp-binding protein, essential for cell growth | AGR3A_Cc150006 | Not Available | Positive | 290597 - 292033 | 53140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

