Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AGR3A_Cc10148 | Not Available | Negative | 156454 - 156543 | 3196.94 |
| urease accessory protein ureg | AGR3A_Cc100001 | Not Available | Positive | 156789 - 157451 | 23328.1 |
| metal dependent hydrolase | AGR3A_Cc100002 | Not Available | Positive | 157455 - 158279 | 28983.4 |
| regulator of biofilm formation, fnr family | AGR3A_Cc100003 | Not Available | Negative | 158369 - 159151 | 28512.6 |
| urease accessory protein uree | AGR3A_Cc110002 | Not Available | Positive | 159763 - 160254 | 18430.9 |
| urease accessory protein uref | AGR3A_Cc110003 | Not Available | Positive | 160258 - 160929 | 23085.6 |
| acr family transporter | AGR3A_Cc120001 | Not Available | Negative | 161187 - 164507 | 119893.0 |
| hlyd family secretion protein | AGR3A_Cc120002 | Not Available | Negative | 164521 - 165714 | 41250.1 |
| abc transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) | AGR3A_Cc120003 | Not Available | Negative | 166079 - 167071 | 35746.9 |
| abc transporter, membrane spanning protein | AGR3A_Cc120004 | Not Available | Negative | 167093 - 167965 | 31716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

