Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cobe protein | AGR3A_Cc10091 | Not Available | Positive | 98841 - 99260 | 13908.5 |
| precorrin-4 c(11)-methyltransferase | AGR3A_Cc10092 | Not Available | Positive | 99257 - 100030 | 27249.8 |
| putative cobalt-precorrin-6a synthase, cbid | AGR3A_Cc10093 | Not Available | Negative | 99985 - 101115 | 38879.6 |
| uroporphyrinogen-iii c-methyltransferase | AGR3A_Cc10094 | Not Available | Positive | 101174 - 101962 | 27250.2 |
| cobyrinic acid a,c-diamide synthase | AGR3A_Cc10095 | Not Available | Positive | 101959 - 103275 | 45944.9 |
| putative methylamine utilization protein maug | AGR3A_Cc10096 | Not Available | Positive | 103504 - 104748 | 44744.8 |
| 3-isopropylmalate dehydrogenase (beta-ipm dehydrogenase) (imdh) (3-ipm-dh) | AGR3A_Cc10097 | Not Available | Negative | 104729 - 105841 | 39621.9 |
| 3-isopropylmalate dehydratase small subunit (isopropylmalate isomerase) (alpha-ipm isomerase) (ipmi) | AGR3A_Cc10098 | Not Available | Negative | 106059 - 106664 | 22019.2 |
| conserved exported hypothetical protein | AGR3A_Cc10099 | Not Available | Negative | 106829 - 107059 | 8135.3 |
| putative citrate lyase beta chain (citrase beta chain) (citrate (pro-3s)-lyase beta chain) (citryl-coa lyase subunit) (cite) | AGR3A_Cc10100 | Not Available | Positive | 107169 - 108080 | 33248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

