Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | AGR3A_Cc10061 | Not Available | Positive | 64814 - 65695 | 32328.5 |
| conserved hypothetical protein | AGR3A_Cc10062 | Not Available | Negative | 65758 - 65958 | 7311.37 |
| protease htpx homolog | AGR3A_Cc10063 | Not Available | Positive | 66078 - 67037 | 34733.0 |
| putative ribosomal rna small subunit methyltransferase b (rrna (cytosine-c(5)-)-methyltransferase) (16s rrna m5c967 methyltransferase)(rsmb) | AGR3A_Cc10064 | Not Available | Positive | 67034 - 68434 | 50265.3 |
| conserved hypothetical protein | AGR3A_Cc10065 | Not Available | Positive | 68535 - 70226 | 62735.4 |
| bifunctional purine biosynthesis protein purh (includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (aicar transformylase) | AGR3A_Cc10066 | Not Available | Positive | 70393 - 72009 | 56943.0 |
| putative d-galactarate dehydratase/altronate hydrolase | AGR3A_Cc10067 | Not Available | Negative | 72096 - 73628 | 54862.3 |
| gntr family transcriptional regulator | AGR3A_Cc10068 | Not Available | Negative | 73671 - 74390 | 26722.1 |
| putative sugar (d-ribose) abc transporter (atp-binding protein) | AGR3A_Cc10069 | Not Available | Positive | 74621 - 76183 | 57155.8 |
| ribose transport system permease protein rbsc | AGR3A_Cc10070 | Not Available | Positive | 76192 - 77214 | 35005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

