Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | AGR3A_Cc10031 | Not Available | Positive | 33111 - 36668 | 130779.0 |
| thioredoxin 1, redox factor | AGR3A_Cc10032 | Not Available | Positive | 36747 - 37067 | 11104.4 |
| putative folc bifunctional protein (includes: folylpolyglutamate synthase (folylpoly-gamma-glutamate synthetase) (fpgs) (tetrahydrofolate synthase) (tetrahydrofolylpolyglutamate synthase) | AGR3A_Cc10033 | Not Available | Negative | 37115 - 38458 | 47848.6 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta (accase beta chain) | AGR3A_Cc10034 | Not Available | Negative | 38579 - 39475 | 32854.2 |
| tryptophan synthase alpha chain | AGR3A_Cc10035 | Not Available | Negative | 39502 - 40353 | 29780.1 |
| tryptophan synthase beta chain | AGR3A_Cc10036 | Not Available | Negative | 40346 - 41566 | 43839.5 |
| n-(5'-phosphoribosyl)anthranilate isomerase (prai) | AGR3A_Cc10037 | Not Available | Negative | 41568 - 42230 | 23434.0 |
| conserved hypothetical protein | AGR3A_Cc10038 | Not Available | Negative | 42330 - 43097 | 28367.4 |
| putative intracellular phb depolymerase | AGR3A_Cc10039 | Not Available | Negative | 43166 - 44398 | 46058.2 |
| putative isomerase/decarboxylase related protein family | AGR3A_Cc10040 | Not Available | Negative | 44525 - 45367 | 29630.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

