Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved membrane hypothetical protein | AGR3A_Cc250179 | Not Available | Positive | 1460021 - 1461322 | 44372.9 |
| rnd family efflux transporter, mfp subunit | AGR3A_Cc250180 | Not Available | Positive | 1461319 - 1462629 | 46362.2 |
| cation/multidrug efflux pump | AGR3A_Cc250181 | Not Available | Positive | 1462629 - 1465748 | 111204.0 |
| conserved hypothetical protein | AGR3A_Cc250182 | Not Available | Positive | 1465745 - 1466512 | 28212.6 |
| putative enzyme | AGR3A_Cc250183 | Not Available | Positive | 1466537 - 1467316 | 29623.0 |
| hypothetical protein | AGR3A_Cc250184 | Not Available | Negative | 1467372 - 1467563 | 6971.58 |
| transcriptional regulator, tetr family | AGR3A_Cc250185 | Not Available | Positive | 1467411 - 1468070 | 23783.3 |
| polyketide-type polyunsaturated fatty acid synthase pfaa (fragment) | AGR3A_Cc260001 | Not Available | Positive | 1472469 - 1475672 | 114859.0 |
| beta-ketoacyl-acyl-carrier-protein synthase i., 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase | AGR3A_Cc260002 | Not Available | Positive | 1475794 - 1479957 | 150569.0 |
| putative glutamate-1-semialdehyde 2,1-aminomutase (fragment) | AGR3A_Cc260003 | Not Available | Positive | 1479954 - 1481651 | 61488.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

