Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc import atp-binding protein znuc | AGR3A_Cc250074 | Not Available | Positive | 1369082 - 1370014 | 33487.5 |
| abc transporter, membrane spanning protein (zinc) | AGR3A_Cc250075 | Not Available | Positive | 1369875 - 1370825 | 33439.4 |
| metal up-take transcriptional regulator, fur family, similar to zinc | AGR3A_Cc250076 | Not Available | Positive | 1370822 - 1371235 | 15456.4 |
| conserved hypothetical protein | AGR3A_Cc250077 | Not Available | Negative | 1371273 - 1371806 | 18743.3 |
| putative fumarylacetoacetate hydrolase family protein | AGR3A_Cc250078 | Not Available | Negative | 1371842 - 1372531 | 24565.5 |
| pp_01410 | AGR3A_Cc250079 | Not Available | Positive | 1372670 - 1373680 | Not Available |
| conserved hypothetical protein (duf72) | AGR3A_Cc250080 | Not Available | Negative | 1373920 - 1374720 | 29706.3 |
| uvrabc system protein a (uvra protein)(excinuclease abc subunit a)(excinuclease atpase subunit) | AGR3A_Cc250081 | Not Available | Negative | 1374880 - 1377801 | 107083.0 |
| single-stranded dna-binding protein controls activity of recbcd nuclease | AGR3A_Cc250082 | Not Available | Positive | 1378011 - 1378673 | 23382.9 |
| exported hypothetical protein | AGR3A_Cc250083 | Not Available | Positive | 1378462 - 1378716 | 8515.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

