Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-(acyl-carrier-protein) synthase ii (beta-ketoacyl-acp synthase ii) | AGR3A_Cc250007 | Not Available | Positive | 1305273 - 1306556 | 44663.9 |
| nadph:quinone reductase | AGR3A_Cc250008 | Not Available | Positive | 1306719 - 1307747 | 36965.3 |
| lipid a biosynthesis lauroyl acyltransferase | AGR3A_Cc250009 | Not Available | Positive | 1307744 - 1308682 | 35851.4 |
| conserved hypothetical protein | AGR3A_Cc250010 | Not Available | Positive | 1308962 - 1309657 | 26529.6 |
| conserved membrane hypothetical protein | AGR3A_Cc250011 | Not Available | Negative | 1309716 - 1310519 | 27941.2 |
| inosine-uridine preferring nucleoside hydrolase | AGR3A_Cc250012 | Not Available | Positive | 1310701 - 1311660 | 34419.4 |
| putative plp-dependent aminotransferase, putative aspartate aminotransferase | AGR3A_Cc250013 | Not Available | Positive | 1311963 - 1313183 | 44762.9 |
| homoserine dehydrogenase (hdh) | AGR3A_Cc250014 | Not Available | Positive | 1313245 - 1314555 | 46305.9 |
| conserved hypothetical protein | AGR3A_Cc250015 | Not Available | Positive | 1314767 - 1314991 | 8312.1 |
| putative single-stranded-dna-specific exonuclease recj | AGR3A_Cc250016 | Not Available | Positive | 1315101 - 1316903 | 63724.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

