Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AGR3A_Cc220002 | Not Available | Positive | 1243973 - 1244878 | 33321.8 |
| nitroreductase | AGR3A_Cc220003 | Not Available | Positive | 1245229 - 1245942 | 26304.4 |
| hypothetical protein | AGR3A_Cc220004 | Not Available | Negative | 1245999 - 1246952 | 33297.5 |
| hypothetical protein | AGR3A_Cc220005 | Not Available | Negative | 1247160 - 1247819 | 23305.5 |
| conserved exported hypothetical protein | AGR3A_Cc220006 | Not Available | Negative | 1248171 - 1249274 | 39966.0 |
| nad-dependent malic enzyme | AGR3A_Cc220007 | Not Available | Negative | 1249407 - 1251722 | 83033.1 |
| putative mandelate racemase/muconate lactonizing enzyme family | AGR3A_Cc230001 | Not Available | Negative | 1252787 - 1253770 | 35155.1 |
| putative abc transporter (permease protein) | AGR3A_Cc230002 | Not Available | Positive | 1253914 - 1255074 | 40705.1 |
| putative abc transporter (atp-binding protein) | AGR3A_Cc230003 | Not Available | Positive | 1255085 - 1255921 | 30791.4 |
| abc transporter, substrate binding protein | AGR3A_Cc230004 | Not Available | Positive | 1255929 - 1257299 | 48027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

