Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transmembrane transcriptional regulator (anti-sigma factor) | AGR3A_Cc20205 | Not Available | Negative | 1136293 - 1137072 | 28289.5 |
| putative ecf family sigma factor | AGR3A_Cc20206 | Not Available | Negative | 1137069 - 1137575 | 19085.3 |
| conserved hypothetical protein, lipid/polyisoprenoid-binding, ycei-like precursor | AGR3A_Cc20207 | Not Available | Negative | 1137932 - 1138498 | 20243.1 |
| hypothetical protein | AGR3A_Cc20208 | Not Available | Negative | 1138557 - 1138793 | 8396.76 |
| lysr family transcriptional regulator | AGR3A_Cc20209 | Not Available | Positive | 1138882 - 1139790 | 32908.8 |
| carbon-nitrogen hydrolase family protein | AGR3A_Cc20210 | Not Available | Positive | 1139917 - 1140720 | 29313.9 |
| siderophore biosynthesis protein, related to 2-demethylmenaquinone methyltransferase | AGR3A_Cc20211 | Not Available | Positive | 1140735 - 1141400 | 23581.0 |
| opine/polyamine abc transporter periplasmic binding protein | AGR3A_Cc20212 | Not Available | Positive | 1141463 - 1142503 | 37025.5 |
| hypothetical protein | AGR3A_Cc20213 | Not Available | Positive | 1142662 - 1142841 | 7186.56 |
| putative abc transporter (atp-binding protein) | AGR3A_Cc20214 | Not Available | Positive | 1142774 - 1143847 | 38483.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

