Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved membrane hypothetical protein | AGR3A_Cc20115 | Not Available | Positive | 1029569 - 1029982 | 15038.0 |
| putative threonine efflux protein | AGR3A_Cc20116 | Not Available | Positive | 1029996 - 1030640 | 23214.1 |
| dihydrolipoamide dehydrogenase, fad/nad(p)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes | AGR3A_Cc20117 | Not Available | Positive | 1030708 - 1032114 | 48681.1 |
| cytochrome b561 | AGR3A_Cc20118 | Not Available | Positive | 1032242 - 1032742 | 18731.2 |
| conserved hypothetical protein | AGR3A_Cc20119 | Not Available | Positive | 1032931 - 1033455 | 18962.9 |
| conserved hypothetical protein | AGR3A_Cc20120 | Not Available | Negative | 1033439 - 1034533 | 39596.4 |
| tyrosine recombinase (integrase/recombinase) | AGR3A_Cc20121 | Not Available | Negative | 1034614 - 1035561 | 34196.5 |
| primosomal protein n' (replication factor y) | AGR3A_Cc20122 | Not Available | Positive | 1035608 - 1037899 | 83871.2 |
| conserved membrane hypothetical protein | AGR3A_Cc20123 | Not Available | Positive | 1037980 - 1038366 | 13443.7 |
| atp synthase subunit delta, membrane-bound, f1 sector | AGR3A_Cc20124 | Not Available | Positive | 1038628 - 1039194 | 19685.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

