Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase hydrophobic membrane anchor protein | AGR3A_Cc20105 | Not Available | Positive | 1016725 - 1017105 | 13673.5 |
| succinate dehydrogenase flavoprotein subunit | AGR3A_Cc20106 | Not Available | Positive | 1017113 - 1018954 | 66742.1 |
| succinate dehydrogenase, fe-s protein | AGR3A_Cc20107 | Not Available | Positive | 1018970 - 1019749 | 29550.5 |
| outer membrane lipoprotein omp19 homolog | AGR3A_Cc20108 | Not Available | Positive | 1019955 - 1020497 | 18402.5 |
| putative atpase (yhcm) afg1 family | AGR3A_Cc20109 | Not Available | Positive | 1020591 - 1021754 | 43098.2 |
| malate dehydrogenase | AGR3A_Cc20110 | Not Available | Positive | 1021933 - 1022895 | 33567.1 |
| succinyl-coa synthetase, beta subunit | AGR3A_Cc20111 | Not Available | Positive | 1022928 - 1024121 | 41845.5 |
| succinyl-coa synthetase, alpha subunit, nad(p)-binding | AGR3A_Cc20112 | Not Available | Positive | 1024139 - 1025041 | 31141.9 |
| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding | AGR3A_Cc20113 | Not Available | Positive | 1025220 - 1028216 | 112271.0 |
| dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (e2) | AGR3A_Cc20114 | Not Available | Positive | 1028270 - 1029499 | 42561.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

