Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AGR3A_Cc20095 | Not Available | Negative | 1008800 - 1010251 | 49341.5 |
| uroporphyrinogen-iii synthase | AGR3A_Cc20096 | Not Available | Negative | 1010325 - 1011065 | 25917.2 |
| porphobilinogen deaminase | AGR3A_Cc20097 | Not Available | Negative | 1011070 - 1011999 | 33632.3 |
| putative o-sialoglycoprotein endopeptidase, with actin-like atpase domain (ygjd,gcp) | AGR3A_Cc20098 | Not Available | Positive | 1012073 - 1013170 | 38711.6 |
| glycerol-3-phosphate dehydrogenase (nad+) | AGR3A_Cc20099 | Not Available | Positive | 1013170 - 1014153 | 33536.6 |
| protein ycii | AGR3A_Cc20100 | Not Available | Positive | 1014242 - 1014535 | 10447.5 |
| conserved hypothetical protein | AGR3A_Cc20101 | Not Available | Positive | 1014542 - 1014985 | 16680.9 |
| conserved hypothetical protein | AGR3A_Cc20102 | Not Available | Positive | 1014993 - 1015637 | 23423.1 |
| conserved exported hypothetical protein | AGR3A_Cc20103 | Not Available | Negative | 1015647 - 1016015 | 12901.5 |
| succinate dehydrogenase cytochrome b556 subunit | AGR3A_Cc20104 | Not Available | Positive | 1016321 - 1016713 | 14650.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

