Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | AGR3A_Cc20045 | Not Available | Negative | 963352 - 963669 | 11952.2 |
| 4.5s-rnp protein, gtp-binding export factor, part of signal recognition particle with 4.5 rna, ffh family (fifty four homolog) | AGR3A_Cc20046 | Not Available | Negative | 963680 - 965248 | 54859.1 |
| putative metallo-hydrolase/oxidoreductase | AGR3A_Cc20047 | Not Available | Positive | 965615 - 966646 | 37869.1 |
| diaminopimelate epimerase | AGR3A_Cc20048 | Not Available | Positive | 966767 - 967666 | 32247.4 |
| putative miab-like trna modifying enzyme | AGR3A_Cc20049 | Not Available | Positive | 967663 - 968937 | 46550.1 |
| signal recognition particle receptor ftsy | AGR3A_Cc20050 | Not Available | Positive | 968970 - 970406 | 50553.8 |
| putative intracellular septation protein (ispa/ispz family), putative membrane protein | AGR3A_Cc20051 | Not Available | Positive | 970409 - 971059 | 24350.5 |
| upf0314 protein atu8092 | AGR3A_Cc20052 | Not Available | Positive | 971056 - 971652 | 22618.0 |
| putative diguanylate cyclase (ggdef) protein | AGR3A_Cc20053 | Not Available | Positive | 971745 - 972926 | 42980.6 |
| periplasmic thioredoxin (cytochrome c biogenesis) | AGR3A_Cc20054 | Not Available | Negative | 972944 - 973549 | 21252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

