Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease protein | AGR3A_Cc20035 | Not Available | Positive | 953549 - 955063 | 54937.5 |
| 3-isopropylmalate dehydratase large subunit 2 (isopropylmalate isomerase 2) (alpha-ipm isomerase 2) (ipmi 2) | AGR3A_Cc20036 | Not Available | Negative | 955125 - 956534 | 50931.5 |
| putative tartrate transporter | AGR3A_Cc20037 | Not Available | Positive | 956937 - 958214 | 46376.4 |
| polar amino acid abc transporter inner membrane subunit | AGR3A_Cc20038 | Not Available | Negative | 958262 - 959095 | 30447.2 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | AGR3A_Cc20039 | Not Available | Negative | 959092 - 959889 | 28708.4 |
| 50s ribosomal protein l19 | AGR3A_Cc20040 | Not Available | Negative | 960015 - 960554 | 19461.1 |
| putative permease | AGR3A_Cc20041 | Not Available | Positive | 960822 - 961568 | 25803.3 |
| trna (guanine-n(1)-)-methyltransferase | AGR3A_Cc20042 | Not Available | Negative | 961550 - 962248 | 25205.2 |
| 16s rrna processing protein, putative function | AGR3A_Cc20043 | Not Available | Negative | 962253 - 962819 | 20198.7 |
| 30s ribosomal protein s16 | AGR3A_Cc20044 | Not Available | Negative | 962941 - 963318 | 13721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

