Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase (monofunctional tgase) | AGR3A_Cc20025 | Not Available | Positive | 943718 - 944464 | 27350.4 |
| aldose 1-epimerase | AGR3A_Cc20026 | Not Available | Negative | 944479 - 945498 | 37427.0 |
| homoserine o-succinyltransferase | AGR3A_Cc20027 | Not Available | Negative | 945573 - 946499 | 35767.7 |
| thiamine pyrophosphokinase | AGR3A_Cc20028 | Not Available | Positive | 946748 - 947401 | 22465.6 |
| abc transporter with duplicated atpase domains | AGR3A_Cc20029 | Not Available | Positive | 947406 - 949232 | 67818.8 |
| conserved hypothetical protein | AGR3A_Cc20030 | Not Available | Positive | 949324 - 949716 | 14622.3 |
| thiamine-binding periplasmic protein | AGR3A_Cc20031 | Not Available | Positive | 949909 - 950922 | 36911.2 |
| thiamine transport system permease protein thip | AGR3A_Cc20032 | Not Available | Positive | 950942 - 952582 | 58031.1 |
| thiamine import atp-binding protein thiq | AGR3A_Cc20033 | Not Available | Positive | 952579 - 953295 | 25450.7 |
| conserved hypothetical protein | AGR3A_Cc20034 | Not Available | Positive | 953336 - 953521 | 7001.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

