Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AGR3A_Cc20015 | Not Available | Negative | 931385 - 931705 | 11233.5 |
| conserved exported hypothetical protein | AGR3A_Cc20016 | Not Available | Positive | 931653 - 931898 | 8513.62 |
| beta-(1-->2)glucan export atp-binding/permease protein ndva | AGR3A_Cc20017 | Not Available | Negative | 931995 - 933758 | 64546.1 |
| luxr family transcriptional regulator | AGR3A_Cc20018 | Not Available | Positive | 934097 - 934834 | 27655.3 |
| pyruvate carboxylase | AGR3A_Cc20019 | Not Available | Positive | 934941 - 938402 | 126815.0 |
| deor family transcriptional regulator | AGR3A_Cc20020 | Not Available | Positive | 938531 - 939331 | 28081.0 |
| mfs permease | AGR3A_Cc20021 | Not Available | Positive | 939297 - 940535 | 42944.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | AGR3A_Cc20022 | Not Available | Positive | 940656 - 941906 | 44792.9 |
| porin, outer membrane lipoprotein omp16 precursor | AGR3A_Cc20023 | Not Available | Positive | 941973 - 942635 | 22625.9 |
| putative geranyltranstransferase (farnesyl-diphosphate synthase) (fpp synthase) | AGR3A_Cc20024 | Not Available | Negative | 942668 - 943582 | 32201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

