Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tomkonis |
| Strain | CFBP 6623 CFBP 6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115388 bp
Thymine Count
1127456 bp
Guanine Count
1637206 bp
Cytosine Count
1616654 bp
Genome Length
5496704 bp
Protein-coding Genes
5297 genes
Non-Coding Genes
197 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase (methylglyoxalase) (aldoketomutase) (glyoxalase i) (glx i) (ketone-aldehyde mutase) (s-d-lactoylglutathione methylglyoxal lyase) | AGR3A_Cc190046 | Not Available | Positive | 812873 - 813313 | 16854.1 |
| conserved exported hypothetical protein | AGR3A_Cc190047 | Not Available | Positive | 813472 - 814728 | 43225.9 |
| Trna-lys | Not Available | Not Available | Positive | 815829 - 815904 | Not Available |
| putative transmembrane cytochrome c biogenesis protein | AGR3A_Cc190050 | Not Available | Positive | 816186 - 816932 | 26444.3 |
| putative malonate transporter | AGR3A_Cc190051 | Not Available | Positive | 816967 - 817905 | 33695.1 |
| putative fad-dependent monoxygenase | AGR3A_Cc190052 | Not Available | Negative | 817889 - 819097 | 43109.0 |
| putative phosphatidylcholine synthase | AGR3A_Cc190053 | Not Available | Positive | 819280 - 820032 | 27697.4 |
| putative abc transporter (atp-binding protein) | AGR3A_Cc190054 | Not Available | Positive | 820232 - 821803 | 55555.3 |
| putative abc transporter (permease protein) | AGR3A_Cc190055 | Not Available | Positive | 821793 - 822884 | 39248.1 |
| putative abc transporter (permease protein) | AGR3A_Cc190056 | Not Available | Positive | 822881 - 823804 | 32384.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

