Agrobacterium fabacearum TT111

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium fabacearum TT111 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolic activity and possesses flagella, granting it mobility. This species thrives optimally at a temperature of 25 degrees Celsius and is categorized as mesophilic, indicating it can grow within a moderate temperature range. The organism is characterized by having a single replicon and two membranes, which is typical of Gram-negative bacteria. A. fabacearum TT111 engages in a free-living lifestyle, suggesting it does not rely on a host for survival and can inhabit various environments. Its habitat is classified as multiple, indicating a versatility in ecological niches. The traits of A. fabacearum TT111 highlight its adaptability and ecological role. Its ability to thrive in diverse habitats and its free-living nature may contribute to its importance in soil ecosystems, where it could play a role in nutrient cycling or plant interactions. Understanding these characteristics can provide insights into its potential applications in agriculture or biotechnology, particularly in relation to its interactions with plant species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium fabacearum TT111
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 1 str. TT111 genome assembly, contig:

Gene Summary

Adenine Count

1230810 bp

Thymine Count

1225375 bp

Guanine Count

1722066 bp

Cytosine Count

1735393 bp

Genome Length

5913644 bp

Protein-coding Genes

5727 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-recycling factorAGR1C_Cc20033Not AvailablePositive1249760 - 125031720627.7
undecaprenyl pyrophosphate synthetase 2 (upp synthetase 2) (di-trans,poly-cis-decaprenylcistransferase 2) (undecaprenyl diphosphate synthase 2) (uds 2)AGR1C_Cc20034Not AvailablePositive1250382 - 125113428508.0
phosphatidate cytidylyltransferase (cdp-diacylglycerol synthase)AGR1C_Cc20035Not AvailablePositive1251124 - 125195729124.0
putative zinc metalloproteaseAGR1C_Cc20036Not AvailablePositive1251995 - 125312840203.1
putative outer membrane protein assembly factorAGR1C_Cc20037Not AvailablePositive1253328 - 125565284199.0
udp-3-o-(3-hydroxymyristoyl)-glucosamine n-acyltransferaseAGR1C_Cc20038Not AvailablePositive1255702 - 125676936912.7
(3r)-hydroxymyristol acyl carrier protein dehydrataseAGR1C_Cc20039Not AvailablePositive1256735 - 125722918275.4
acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase (udp-n-acetylglucosamine acyltransferase)AGR1C_Cc20040Not AvailablePositive1257226 - 125804128324.1
conserved hypothetical proteinAGR1C_Cc20041Not AvailablePositive1258045 - 125892630454.2
lipid-a-disaccharide synthaseAGR1C_Cc20042Not AvailablePositive1258923 - 126009543185.7

Displaying genes 1361 – 1370 of 1393 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.