Agrobacterium fabacearum S56 str. S56

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium fabacearum S56 str. S56 is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This organism is classified as an aerobe, indicating that it requires oxygen for its metabolic processes. Agrobacterium fabacearum S56 thrives optimally at a temperature of 25°C and is categorized as mesophilic, which means it can grow within a moderate temperature range. The bacterium has a unique cellular structure, featuring two membranes and a single replicon. It exists as a free-living organism, indicating that it does not rely on a host for survival, allowing it to inhabit multiple environments. This adaptability to various habitats may play a significant role in its ecological interactions, especially in soil and plant environments where it could contribute to nutrient cycling or potentially interact with plant species. Given its traits, Agrobacterium fabacearum S56 str. S56 may be particularly significant in agricultural contexts, as members of the Agrobacterium genus are known for their roles in plant-pathogen interactions. The bacterium's free-living nature suggests it may influence plant health and soil dynamics, highlighting the importance of understanding its ecological roles in diverse habitats. This knowledge could inform strategies for sustainable agriculture and microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium fabacearum S56 str. S56
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 1 str. S56 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5890 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dienelactone hydrolaseAGR1B_Cc40217Not AvailablePositive2357225 - 235823535922.3
conserved membrane hypothetical proteinAGR1B_Cc40218Not AvailableNegative2358260 - 235869416335.4
hypothetical proteinAGR1B_Cc40219Not AvailablePositive2359327 - 23595788657.59
conserved hypothetical proteinAGR1B_Cc40220Not AvailableNegative2359652 - 23598407177.76
conserved hypothetical proteinAGR1B_Cc40221Not AvailableNegative2360136 - 23603607962.4
conserved exported hypothetical proteinAGR1B_Cc40222Not AvailableNegative2360556 - 23608139294.95
conserved exported hypothetical proteinAGR1B_Cc40223Not AvailableNegative2360977 - 236130912133.1
conserved hypothetical proteinAGR1B_Cc40224Not AvailablePositive2361700 - 236219718293.5
Trna-lysNot AvailableNot AvailablePositive2362332 - 2362407Not Available
conserved membrane hypothetical proteinAGR1B_Cc40225Not AvailableNegative2362563 - 23628178726.21

Displaying genes 2401 – 2410 of 2617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.