Agrobacterium deltaense Zutra 3/1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium deltaense Zutra 3/1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is motile, possessing flagella, which facilitates its movement in various environments. Notably, Agrobacterium deltaense Zutra 3/1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and functionality in diverse ecological niches. The strain is cataloged under the accession number FBWG00000000.1, which serves as a reference for researchers interested in studying its genetic and phenotypic traits. The presence of only one replicon can have implications for the bacterium's replication and gene expression, potentially influencing its behavior in natural habitats. Biologically, Agrobacterium species are known for their role in plant interactions, particularly in the context of genetic transfer to host plants. The traits of Agrobacterium deltaense Zutra 3/1 may provide insights into its ecological roles, especially in environments where it may interact with plant systems. Understanding the motility and genetic structure of this bacterium could be pivotal in exploring its potential applications in biotechnology or agriculture, particularly in the realm of plant transformation and biocontrol. Overall, the unique characteristics of Agrobacterium deltaense Zutra 3/1 highlight its significance within microbial ecology and its potential utility in various scientific fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium deltae
Strainnse Zutra 3/1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium deltaense Zutra 3/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 7 str. Zutra 3/1 strain Zutra 3-1 genome

Gene Summary

Adenine Count

1146807 bp

Thymine Count

1158227 bp

Guanine Count

1724582 bp

Cytosine Count

1710821 bp

Genome Length

5740437 bp

Protein-coding Genes

5568 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine-5'-phosphate glycosidase 1AGR7C_Cc110343Not AvailableNegative613993 - 61491632516.1
carbohydrate kinaseAGR7C_Cc110344Not AvailableNegative614946 - 61588732786.6
recombinase a (reca)AGR7C_Cc110345Not AvailablePositive616134 - 61721938616.4
alanyl-trna synthetaseAGR7C_Cc110346Not AvailablePositive617422 - 62011596630.6
conserved hypothetical proteinAGR7C_Cc110347Not AvailablePositive620215 - 62059814483.1
glutathione s-transferaseAGR7C_Cc110348Not AvailableNegative620675 - 62130122972.8
conserved membrane hypothetical proteinAGR7C_Cc110349Not AvailableNegative621673 - 62220919671.4
tetr family transcriptional regulatorAGR7C_Cc110350Not AvailablePositive622290 - 62291322162.6
isocitrate dehydrogenase (nadp) (oxalosuccinate decarboxylase) (idh) (nadp(+)-specific icdh) (idp)AGR7C_Cc110351Not AvailableNegative622933 - 62414745150.0
conserved exported hypothetical proteinAGR7C_Cc110352Not AvailablePositive624363 - 62489619425.7

Displaying genes 801 – 810 of 1275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.