Agrobacterium deltaense Zutra 3/1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium deltaense Zutra 3/1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is motile, possessing flagella, which facilitates its movement in various environments. Notably, Agrobacterium deltaense Zutra 3/1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and functionality in diverse ecological niches. The strain is cataloged under the accession number FBWG00000000.1, which serves as a reference for researchers interested in studying its genetic and phenotypic traits. The presence of only one replicon can have implications for the bacterium's replication and gene expression, potentially influencing its behavior in natural habitats. Biologically, Agrobacterium species are known for their role in plant interactions, particularly in the context of genetic transfer to host plants. The traits of Agrobacterium deltaense Zutra 3/1 may provide insights into its ecological roles, especially in environments where it may interact with plant systems. Understanding the motility and genetic structure of this bacterium could be pivotal in exploring its potential applications in biotechnology or agriculture, particularly in the realm of plant transformation and biocontrol. Overall, the unique characteristics of Agrobacterium deltaense Zutra 3/1 highlight its significance within microbial ecology and its potential utility in various scientific fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium deltae
Strainnse Zutra 3/1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium deltaense Zutra 3/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 7 str. Zutra 3/1 strain Zutra 3-1 genome

Gene Summary

Adenine Count

1146807 bp

Thymine Count

1158227 bp

Guanine Count

1724582 bp

Cytosine Count

1710821 bp

Genome Length

5740437 bp

Protein-coding Genes

5568 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorAGR7C_Cc110206Not AvailablePositive498819 - 49947223764.4
ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase)AGR7C_Cc110207Not AvailablePositive499522 - 50054136633.1
conserved hypothetical proteinAGR7C_Cc110208Not AvailableNegative500612 - 50164338344.1
putative abc-type ribose transport system, auxiliary componentAGR7C_Cc110209Not AvailableNegative501752 - 50220416203.7
2-aminoadipate transaminaseAGR7C_Cc110210Not AvailablePositive502478 - 50372244806.6
abc transporter, substrate binding proteinAGR7C_Cc110211Not AvailablePositive504049 - 50503234552.5
abc transporter, membrane spanning proteinAGR7C_Cc110212Not AvailablePositive505042 - 50661055576.0
hypothetical proteinAGR7C_Cc110213Not AvailablePositive506588 - 5067375467.96
fe(3+) ions import atp-binding protein fbpc 1AGR7C_Cc110214Not AvailablePositive506725 - 50775337174.0
conserved hypothetical proteinAGR7C_Cc110215Not AvailablePositive508043 - 50915242204.2

Displaying genes 661 – 670 of 1275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.