Agrobacterium deltaense Zutra 3/1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium deltaense Zutra 3/1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is motile, possessing flagella, which facilitates its movement in various environments. Notably, Agrobacterium deltaense Zutra 3/1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and functionality in diverse ecological niches. The strain is cataloged under the accession number FBWG00000000.1, which serves as a reference for researchers interested in studying its genetic and phenotypic traits. The presence of only one replicon can have implications for the bacterium's replication and gene expression, potentially influencing its behavior in natural habitats. Biologically, Agrobacterium species are known for their role in plant interactions, particularly in the context of genetic transfer to host plants. The traits of Agrobacterium deltaense Zutra 3/1 may provide insights into its ecological roles, especially in environments where it may interact with plant systems. Understanding the motility and genetic structure of this bacterium could be pivotal in exploring its potential applications in biotechnology or agriculture, particularly in the realm of plant transformation and biocontrol. Overall, the unique characteristics of Agrobacterium deltaense Zutra 3/1 highlight its significance within microbial ecology and its potential utility in various scientific fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium deltae
Strainnse Zutra 3/1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium deltaense Zutra 3/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 7 str. Zutra 3/1 strain Zutra 3-1 genome

Gene Summary

Adenine Count

1146807 bp

Thymine Count

1158227 bp

Guanine Count

1724582 bp

Cytosine Count

1710821 bp

Genome Length

5740437 bp

Protein-coding Genes

5568 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductase, fad/nad(p)-bindingAGR7C_Cc110020Not AvailableNegative305736 - 30671034715.7
putative transcriptional regulatory protein asnc/lrp familyAGR7C_Cc110021Not AvailablePositive306977 - 30744417293.2
lipopolysaccharide core biosynthesis mannosyltransferase lpccAGR7C_Cc110022Not AvailableNegative307470 - 30852538701.8
transcription elongation factor grea (transcript cleavage factor grea)AGR7C_Cc110023Not AvailableNegative308616 - 30909217333.4
hypothetical protein, putative elongator protein 3/miab/nifbAGR7C_Cc110024Not AvailablePositive309302 - 31054646384.9
putative uracil-dna glycosylaseAGR7C_Cc110025Not AvailablePositive310546 - 31199454236.3
ggdef family proteinAGR7C_Cc110026Not AvailablePositive312146 - 31328540658.4
conserved hypothetical proteinAGR7C_Cc110027Not AvailableNegative313366 - 3135546806.28
carbamoyl phosphate synthase, large subunitAGR7C_Cc110028Not AvailableNegative313852 - 317340126004.0
response regulator receiver proteinAGR7C_Cc110029Not AvailableNegative317498 - 31831930065.5

Displaying genes 471 – 480 of 1275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.