Agrobacterium deltaense Zutra 3/1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium deltaense Zutra 3/1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is motile, possessing flagella, which facilitates its movement in various environments. Notably, Agrobacterium deltaense Zutra 3/1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and functionality in diverse ecological niches. The strain is cataloged under the accession number FBWG00000000.1, which serves as a reference for researchers interested in studying its genetic and phenotypic traits. The presence of only one replicon can have implications for the bacterium's replication and gene expression, potentially influencing its behavior in natural habitats. Biologically, Agrobacterium species are known for their role in plant interactions, particularly in the context of genetic transfer to host plants. The traits of Agrobacterium deltaense Zutra 3/1 may provide insights into its ecological roles, especially in environments where it may interact with plant systems. Understanding the motility and genetic structure of this bacterium could be pivotal in exploring its potential applications in biotechnology or agriculture, particularly in the realm of plant transformation and biocontrol. Overall, the unique characteristics of Agrobacterium deltaense Zutra 3/1 highlight its significance within microbial ecology and its potential utility in various scientific fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium deltae
Strainnse Zutra 3/1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium deltaense Zutra 3/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 7 str. Zutra 3/1 strain Zutra 3-1 genome

Gene Summary

Adenine Count

1146807 bp

Thymine Count

1158227 bp

Guanine Count

1724582 bp

Cytosine Count

1710821 bp

Genome Length

5740437 bp

Protein-coding Genes

5568 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative aldo/keto reductaseAGR7C_Cc10075Not AvailablePositive78185 - 7919837091.9
conserved hypothetical proteinAGR7C_Cc10076Not AvailablePositive79203 - 8002429940.3
putative l-galactonate oxidoreductaseAGR7C_Cc10077Not AvailablePositive80028 - 8103835859.3
altronate oxidoreductaseAGR7C_Cc10078Not AvailablePositive81035 - 8216841629.9
conserved hypothetical proteinAGR7C_Cc10079Not AvailablePositive82180 - 8250912940.5
mitochondrial enolase superfamily member 1AGR7C_Cc10080Not AvailablePositive82546 - 8382347498.1
putative threonine-phosphate decarboxylaseAGR7C_Cc10081Not AvailableNegative83805 - 8477934639.5
cobalamin biosynthetic protein (anaerobic pathway of cobalamin biosynthesis, cobd)AGR7C_Cc10082Not AvailablePositive84850 - 8581533987.8
cobyric acid synthaseAGR7C_Cc10083Not AvailableNegative85802 - 8725951071.7
cob(i)yrinic acid a,c-diamide adenosyltransferaseAGR7C_Cc10084Not AvailableNegative87261 - 8787822782.6

Displaying genes 251 – 260 of 1275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.