Agrobacterium deltaense RV3

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium deltaense RV3 is a Gram-negative, rod-shaped bacterium. It is characterized by the presence of flagella, which likely contributes to its motility in various environments. This species has a single replicon, indicating a streamlined genomic structure that may influence its replication and adaptability. The accession number for Agrobacterium deltaense RV3 is FBWD00000000.1, which serves as a reference for genetic and genomic studies. This bacterium is part of a genus known for its role in plant interactions, particularly in relation to plant tumors caused by Agrobacterium tumefaciens. Although specific ecological roles of Agrobacterium deltaense RV3 are not detailed, its classification within the Agrobacterium genus suggests potential interactions with plant systems. The presence of flagella may facilitate its movement towards plant hosts or other environmental niches, where it could play a role in nutrient cycling or microbial community dynamics. Understanding the characteristics of Agrobacterium deltaense RV3 can provide insights into its ecological interactions and potential applications in biotechnology, particularly in areas related to agriculture and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium deltae
Strainnse RV3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium deltaense RV3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium genomosp. 7 str. RV3 genome assembly, contig:

Gene Summary

Adenine Count

1065986 bp

Thymine Count

1057496 bp

Guanine Count

1563046 bp

Cytosine Count

1582641 bp

Genome Length

5269169 bp

Protein-coding Genes

5180 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative universal stress protein fAGR7B_Cc30139Not AvailablePositive2159977 - 216038714825.0
dnak suppressor proteinAGR7B_Cc30140Not AvailablePositive2160508 - 216082812162.2
hemolysin iiiAGR7B_Cc30141Not AvailablePositive2161140 - 216180824424.5
putative acyltransferase with acyl-coa n-acyltransferase domainAGR7B_Cc30142Not AvailablePositive2161926 - 216242318435.0
lysine exporter proteinAGR7B_Cc30143Not AvailableNegative2162443 - 216306922531.5
methionine sulfoxide reductase bAGR7B_Cc30144Not AvailableNegative2163187 - 216359415263.0
putative monovalent cation/h+ antiporter subunit aAGR7B_Cc30145Not AvailablePositive2163796 - 216618084469.9
na(+)/h(+) antiporter subunit bAGR7B_Cc30146Not AvailablePositive2166177 - 216659614496.3
na(+)/h(+) antiporter subunit cAGR7B_Cc30147Not AvailablePositive2166596 - 216697313603.0
putative monovalent cation/h+ antiporter subunit dAGR7B_Cc30148Not AvailablePositive2166993 - 216857055144.0

Displaying genes 2221 – 2230 of 2748 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.