Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium deltae |
| Strain | nse RV3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065986 bp
Thymine Count
1057496 bp
Guanine Count
1563046 bp
Cytosine Count
1582641 bp
Genome Length
5269169 bp
Protein-coding Genes
5180 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphonate transport atp-binding protein phnk (abc superfamily, atp_bind)/ c-p lyase component | AGR7B_Cc10111 | Not Available | Negative | 116299 - 117075 | 28583.6 |
| putative phnj protein, phosphonate metabolism | AGR7B_Cc10112 | Not Available | Negative | 117072 - 117974 | 33747.2 |
| putative phni protein, phosphonate metabolism | AGR7B_Cc10113 | Not Available | Negative | 118108 - 119217 | 40636.4 |
| putative phnh protein, phosphonate metabolism | AGR7B_Cc10114 | Not Available | Negative | 119219 - 119827 | 21476.8 |
| phng protein | AGR7B_Cc10115 | Not Available | Negative | 119827 - 120288 | 16917.1 |
| putative transcriptional regulator, gntr family, with an ubic transcription regulator-associated domain | AGR7B_Cc10116 | Not Available | Positive | 120371 - 121108 | 26478.8 |
| 4-hydroxy-tetrahydrodipicolinate (htpa) dehydratase-reductase | AGR7B_Cc10117 | Not Available | Negative | 121117 - 121944 | 28572.1 |
| glucokinase | AGR7B_Cc10118 | Not Available | Negative | 122075 - 123109 | 36738.1 |
| methylglyoxal synthase | AGR7B_Cc10119 | Not Available | Negative | 123120 - 123503 | 13801.7 |
| penicillin-insensitive murein endopeptidase | AGR7B_Cc10120 | Not Available | Negative | 123604 - 124617 | 36751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

