Pyrococcus sp. ST04

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus sp. ST04 is a coccus-shaped archaeon characterized by the presence of flagella, which contribute to its motility. This organism has a single replicon, indicating a streamlined genetic structure that is typical for many extremophiles. Its genomic information is cataloged under the accession number NC_017946.1, allowing researchers to access detailed genetic data for further study. Pyrococcus species are known for their ability to thrive in extreme environments, particularly high-temperature conditions, which aligns with the traits observed in Pyrococcus sp. ST04. The flagella not only facilitate movement but also suggest a potential role in colonization or interaction with other microorganisms in its environment. Given its characteristics, Pyrococcus sp. ST04 may play a significant role in its ecological niche, possibly contributing to biogeochemical cycles in extreme habitats such as hydrothermal vents or hot springs. These environments are often rich in nutrients and provide unique conditions that can be exploited by extremophiles, including members of the Pyrococcus genus. The ability to move towards or away from various stimuli could provide adaptive advantages, allowing Pyrococcus sp. ST04 to optimize its growth and survival in such challenging conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus sp. ST04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus sp. ST04, complete sequence.

Gene Summary

Adenine Count

501515 bp

Thymine Count

500784 bp

Guanine Count

364406 bp

Cytosine Count

370180 bp

Genome Length

1736885 bp

Protein-coding Genes

1831 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxypeptidase m32PY04_RS03380Not AvailablePositive657686 - 65918259372.3
abc transporter permease subunitPY04_RS03385Not AvailableNegative659189 - 66034642414.2
deoxyhypusine synthasePY04_RS03390Not AvailablePositive660509 - 66151938186.3
tasa family proteinPY04_RS03395Not AvailablePositive661663 - 66224721624.0
tigr01177 family methyltransferasePY04_RS03400Not AvailablePositive662292 - 66328137410.5
dhh family phosphoesterasePY04_RS03405Not AvailablePositive663376 - 66559883421.9
cdp-2,3-bis-(o-geranylgeranyl)-sn-glycerol synthasePY04_RS03410Not AvailablePositive665600 - 66610618667.1
era-like gtp-binding proteinPY04_RS03415Not AvailableNegative666107 - 66666720929.1
hypothetical proteinPY04_RS03420Not AvailablePositive666720 - 66703411913.6
hd domain-containing proteinPY04_RS03425Not AvailablePositive667066 - 66759920415.9

Displaying genes 691 – 700 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.