Pyrococcus sp. ST04

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus sp. ST04 is a coccus-shaped archaeon characterized by the presence of flagella, which contribute to its motility. This organism has a single replicon, indicating a streamlined genetic structure that is typical for many extremophiles. Its genomic information is cataloged under the accession number NC_017946.1, allowing researchers to access detailed genetic data for further study. Pyrococcus species are known for their ability to thrive in extreme environments, particularly high-temperature conditions, which aligns with the traits observed in Pyrococcus sp. ST04. The flagella not only facilitate movement but also suggest a potential role in colonization or interaction with other microorganisms in its environment. Given its characteristics, Pyrococcus sp. ST04 may play a significant role in its ecological niche, possibly contributing to biogeochemical cycles in extreme habitats such as hydrothermal vents or hot springs. These environments are often rich in nutrients and provide unique conditions that can be exploited by extremophiles, including members of the Pyrococcus genus. The ability to move towards or away from various stimuli could provide adaptive advantages, allowing Pyrococcus sp. ST04 to optimize its growth and survival in such challenging conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus sp. ST04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus sp. ST04, complete sequence.

Gene Summary

Adenine Count

501515 bp

Thymine Count

500784 bp

Guanine Count

364406 bp

Cytosine Count

370180 bp

Genome Length

1736885 bp

Protein-coding Genes

1831 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pig-l deacetylase family proteinPY04_RS02845Not AvailablePositive564623 - 56542630867.2
type ii toxin-antitoxin system vapc family toxinPY04_RS02850Not AvailableNegative565419 - 56586817236.5
hypothetical proteinPY04_RS02855Not AvailableNegative565872 - 5660818175.03
beta-galactosidase bgasPY04_RS02860Not AvailableNegative566078 - 56752956522.1
abc transporter substrate-binding proteinPY04_RS02865Not AvailablePositive567751 - 56965571726.3
abc transporter permeasePY04_RS02870Not AvailablePositive569718 - 57071037462.0
abc transporter permeasePY04_RS02875Not AvailablePositive570713 - 57162733988.7
abc transporter atp-binding proteinPY04_RS02880Not AvailablePositive571629 - 57259436170.8
abc transporter atp-binding proteinPY04_RS02885Not AvailablePositive572597 - 57356836725.5
glucosamine-6-phosphate deaminasePY04_RS02890Not AvailablePositive573585 - 57455636777.8

Displaying genes 581 – 590 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.