Pyrococcus sp. ST04

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus sp. ST04 is a coccus-shaped archaeon characterized by the presence of flagella, which contribute to its motility. This organism has a single replicon, indicating a streamlined genetic structure that is typical for many extremophiles. Its genomic information is cataloged under the accession number NC_017946.1, allowing researchers to access detailed genetic data for further study. Pyrococcus species are known for their ability to thrive in extreme environments, particularly high-temperature conditions, which aligns with the traits observed in Pyrococcus sp. ST04. The flagella not only facilitate movement but also suggest a potential role in colonization or interaction with other microorganisms in its environment. Given its characteristics, Pyrococcus sp. ST04 may play a significant role in its ecological niche, possibly contributing to biogeochemical cycles in extreme habitats such as hydrothermal vents or hot springs. These environments are often rich in nutrients and provide unique conditions that can be exploited by extremophiles, including members of the Pyrococcus genus. The ability to move towards or away from various stimuli could provide adaptive advantages, allowing Pyrococcus sp. ST04 to optimize its growth and survival in such challenging conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus sp. ST04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus sp. ST04, complete sequence.

Gene Summary

Adenine Count

501515 bp

Thymine Count

500784 bp

Guanine Count

364406 bp

Cytosine Count

370180 bp

Genome Length

1736885 bp

Protein-coding Genes

1831 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase small subunitPY04_RS08575Not AvailableNegative1613027 - 161351818060.8
3-isopropylmalate dehydratase large subunitPY04_RS08580Not AvailableNegative1613515 - 161465741004.6
homocitrate synthasePY04_RS08585Not AvailableNegative1614654 - 161573940528.9
plp-dependent aminotransferase family proteinPY04_RS08590Not AvailableNegative1615950 - 161710443377.9
aspartate/glutamate racemase family proteinPY04_RS08595Not AvailableNegative1617220 - 161790325846.4
dual specificity protein phosphatase family proteinPY04_RS08600Not AvailablePositive1617977 - 161843517568.3
5s ribosomal rnaNot AvailableNot AvailablePositive1618521 - 1618642Not Available
Trna-aspNot AvailableNot AvailablePositive1618651 - 1618728Not Available
hemk2/mtq2 family protein methyltransferasePY04_RS08615Not AvailablePositive1618766 - 161935322071.8
hypothetical proteinPY04_RS09770Not AvailableNegative1619322 - 16194535356.6

Displaying genes 1741 – 1750 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.