Pyrococcus sp. ST04

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus sp. ST04 is a coccus-shaped archaeon characterized by the presence of flagella, which contribute to its motility. This organism has a single replicon, indicating a streamlined genetic structure that is typical for many extremophiles. Its genomic information is cataloged under the accession number NC_017946.1, allowing researchers to access detailed genetic data for further study. Pyrococcus species are known for their ability to thrive in extreme environments, particularly high-temperature conditions, which aligns with the traits observed in Pyrococcus sp. ST04. The flagella not only facilitate movement but also suggest a potential role in colonization or interaction with other microorganisms in its environment. Given its characteristics, Pyrococcus sp. ST04 may play a significant role in its ecological niche, possibly contributing to biogeochemical cycles in extreme habitats such as hydrothermal vents or hot springs. These environments are often rich in nutrients and provide unique conditions that can be exploited by extremophiles, including members of the Pyrococcus genus. The ability to move towards or away from various stimuli could provide adaptive advantages, allowing Pyrococcus sp. ST04 to optimize its growth and survival in such challenging conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus sp. ST04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus sp. ST04, complete sequence.

Gene Summary

Adenine Count

501515 bp

Thymine Count

500784 bp

Guanine Count

364406 bp

Cytosine Count

370180 bp

Genome Length

1736885 bp

Protein-coding Genes

1831 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinPY04_RS07880Not AvailablePositive1490081 - 149144251061.8
carbohydrate abc transporter permeasePY04_RS07885Not AvailablePositive1491450 - 149239435463.2
carbohydrate abc transporter permeasePY04_RS07890Not AvailablePositive1492391 - 149322431251.3
abc transporter atp-binding proteinPY04_RS07895Not AvailablePositive1493224 - 149431841196.7
hypothetical proteinPY04_RS07900Not AvailablePositive1494395 - 149489518872.3
non-hydrolyzing udp-n-acetylglucosamine 2-epimerasePY04_RS07905Not AvailableNegative1494885 - 149602142556.9
udp-n-acetyl-d-mannosamine dehydrogenasePY04_RS07910Not AvailableNegative1496018 - 149727446044.1
duf354 domain-containing proteinPY04_RS07915Not AvailablePositive1497522 - 149863442012.4
stage ii sporulation protein mPY04_RS09535Not AvailableNegative1498545 - 149910220022.7
lipoate protein ligase c-terminal domain-containing proteinPY04_RS07920Not AvailableNegative1499087 - 149938011326.6

Displaying genes 1601 – 1610 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.