Pseudomonas sp. M47T1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. M47T1 is characterized by having a single replicon, which is an important trait for its genomic stability and replication process. The genome of this strain is accessible under the accession number AJWX00000000.1, which allows for further exploration and study of its genetic composition. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments. They can utilize a wide range of organic compounds, making them significant in ecological roles such as bioremediation and nutrient cycling. This particular strain may possess unique attributes that contribute to its ecological niche, although specifics about phenotypic traits or metabolic capabilities are not provided. The presence of a single replicon suggests a streamlined genomic organization, which may confer advantages in adaptation and survival in fluctuating environments. Such traits are particularly relevant in contexts where microbial competition and resource availability fluctuate, allowing Pseudomonas sp. M47T1 to effectively exploit its surroundings. In summary, Pseudomonas sp. M47T1, with its single replicon and accessible genomic data, represents a potential subject for study in microbial ecology and biotechnology, particularly in understanding its role in environmental processes and possible applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. M47T1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. M47T1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. M47T1 contig088, whole genome shotgun sequence.

Gene Summary

Adenine Count

1176849 bp

Thymine Count

1189595 bp

Guanine Count

1978097 bp

Cytosine Count

1966092 bp

Genome Length

6310633 bp

Protein-coding Genes

5661 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
taurine dioxygenasePMM47T1_21103Not AvailableNegative4673063 - 46732517494.97
peroxiredoxin, thioredoxin-like fold proteinPMM47T1_21108Not AvailableNegative4673435 - 467412124763.7
transcriptional regulatorPMM47T1_21113P40193Negative4674661 - 467595646500.8
glutamine amidotransferasePMM47T1_21118Not AvailablePositive4676045 - 467671023529.4
mosc domain-containing proteinPMM47T1_21123P32157Positive4676710 - 467739925251.5
rna polymerase sigma factorPMM47T1_21128Not AvailablePositive4677728 - 46779257111.85
putative transcriptional regulatorPMM47T1_21133O34817Negative4678064 - 467878327181.4
monooxygenasePMM47T1_21138Not AvailableNegative4678780 - 468017450470.9
ribosyl nicotinamide transporterPMM47T1_21143Not AvailableNegative4680171 - 468076422231.6
tonb-dependent siderophore receptorPMM47T1_21148Not AvailableNegative4680777 - 468293379638.0

Displaying genes 4221 – 4230 of 5752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

364 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da

Displaying 1–10 of 364 metabolites

Health Effects

No health effects information available for this bacterium.