Saccharothrix espanaensis DSM 44229

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix espanaensis DSM 44229 is a species characterized by a single replicon, which is a notable trait in its genomic structure. The genomic sequence of this organism is accessible under the accession number NC_019673.1. As a member of the genus Saccharothrix, this species is part of the actinobacteria phylum, which is known for its diverse metabolic capabilities and significance in natural environments. Actinobacteria are often recognized for their role in soil health and their ability to produce various bioactive compounds, including antibiotics. The presence of a single replicon in Saccharothrix espanaensis might suggest a streamlined genetic organization, which can be advantageous for maintaining genomic stability and efficient replication under specific environmental conditions. This could have implications for its adaptability and survival in various ecological niches. In summary, Saccharothrix espanaensis DSM 44229, with its singular replicon and characterized genomic information, represents an intriguing subject of study within the actinobacteria. Understanding its genomic structure may provide insights into its ecological roles and potential applications in biotechnology, particularly in the discovery of novel metabolites.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix espanaensis
StrainDSM 44229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix espanaensis DSM 44229, complete sequence.

Gene Summary

Adenine Count

1300723 bp

Thymine Count

1302468 bp

Guanine Count

3379122 bp

Cytosine Count

3378339 bp

Genome Length

9360653 bp

Protein-coding Genes

8434 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine synthase dusbBN6_RS39635Not AvailablePositive8995572 - 899670840566.8
hypothetical proteinBN6_RS39640Not AvailablePositive8996734 - 899715915029.9
ggdef domain-containing proteinBN6_RS39645Not AvailablePositive8997384 - 899824131228.7
lcp family proteinBN6_RS44690Not AvailablePositive9000114 - 900192564084.6
phosphate signaling complex protein phouBN6_RS39655Not AvailablePositive9002010 - 900267524377.9
esx secretion-associated protein espgBN6_RS39660Not AvailableNegative9002779 - 900357629283.8
hypothetical proteinBN6_RS47210Not AvailableNegative9003573 - 900513249947.2
hypothetical proteinBN6_RS39670Not AvailableNegative9005148 - 900571118972.5
hypothetical proteinBN6_RS39675Not AvailableNegative9005719 - 900608712906.2
phosphate abc transporter atp-binding protein pstbBN6_RS39680Not AvailableNegative9006325 - 900710128244.1

Displaying genes 8161 – 8170 of 8526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

31 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da

Displaying 1–10 of 31 metabolites

Health Effects

No health effects information available for this bacterium.