Saccharothrix espanaensis DSM 44229

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix espanaensis DSM 44229 is a species characterized by a single replicon, which is a notable trait in its genomic structure. The genomic sequence of this organism is accessible under the accession number NC_019673.1. As a member of the genus Saccharothrix, this species is part of the actinobacteria phylum, which is known for its diverse metabolic capabilities and significance in natural environments. Actinobacteria are often recognized for their role in soil health and their ability to produce various bioactive compounds, including antibiotics. The presence of a single replicon in Saccharothrix espanaensis might suggest a streamlined genetic organization, which can be advantageous for maintaining genomic stability and efficient replication under specific environmental conditions. This could have implications for its adaptability and survival in various ecological niches. In summary, Saccharothrix espanaensis DSM 44229, with its singular replicon and characterized genomic information, represents an intriguing subject of study within the actinobacteria. Understanding its genomic structure may provide insights into its ecological roles and potential applications in biotechnology, particularly in the discovery of novel metabolites.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix espanaensis
StrainDSM 44229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix espanaensis DSM 44229, complete sequence.

Gene Summary

Adenine Count

1300723 bp

Thymine Count

1302468 bp

Guanine Count

3379122 bp

Cytosine Count

3378339 bp

Genome Length

9360653 bp

Protein-coding Genes

8434 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseBN6_RS34155Not AvailableNegative7839866 - 784061227412.8
voc family proteinBN6_RS34160Not AvailablePositive7840670 - 784148529022.7
phosphatidate cytidylyltransferaseBN6_RS34165Not AvailableNegative7841493 - 784234129091.2
ribosome recycling factorBN6_RS34170Not AvailableNegative7842457 - 784301420598.5
ump kinaseBN6_RS34175Not AvailableNegative7843062 - 784377225375.9
translation elongation factor tsBN6_RS34180Not AvailableNegative7843885 - 784470029179.6
30s ribosomal protein s2BN6_RS34185Not AvailableNegative7844802 - 784566231451.7
m23 family metallopeptidaseBN6_RS44565Not AvailablePositive7846005 - 784662822243.0
flia/whig family rna polymerase sigma factorBN6_RS34190Not AvailableNegative7846780 - 784776635284.8
tyrosine recombinase xercBN6_RS34195Not AvailableNegative7848403 - 784938034944.8

Displaying genes 7051 – 7060 of 8526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

31 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da

Displaying 1–10 of 31 metabolites

Health Effects

No health effects information available for this bacterium.