Kosakonia radicincitans DSM 16656 str. E. radicincitans D5/23

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Kosakonia

Description

Kosakonia radicincitans DSM 16656, strain E. radicincitans D5/23, is a bacterial species characterized by having a single replicon, which suggests a streamlined genomic structure. The genomic data for this strain is accessible under the accession number NZ_CP018016.1, indicating its recognition in genetic databases. As a member of the Kosakonia genus, K. radicincitans is part of the diverse group of bacteria that can be associated with various ecological niches. The presence of a single replicon may confer metabolic efficiency and adaptability to specific environments. This trait might be advantageous for survival in competitive microbial communities, as it can simplify regulatory mechanisms and energy expenditure in resource-limited conditions. The ecological implications of K. radicincitans are significant, particularly in relation to its potential interactions with plants, as some strains within this genus have been noted for their involvement in plant-microbe interactions. These interactions can play critical roles in nutrient cycling and soil health. Understanding the characteristics of K. radicincitans, including its genomic structure, can provide insights into its ecological roles and potential applications in agriculture or bioremediation. In summary, Kosakonia radicincitans DSM 16656 strain E. radicincitans D5/23, with its single replicon and documented genomic access, represents a noteworthy subject for further study in microbial ecology and its interactions with the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKosakonia
SpeciesKosakonia radicincitans
StrainDSM 16656 E. radicincitans D5/23

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Kosakonia radicincitans DSM 16656 str. E. radicincitans D5/23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kosakonia radicincitans DSM 16656 chromosome, complete genome.

Gene Summary

Adenine Count

1340645 bp

Thymine Count

1336525 bp

Guanine Count

1567988 bp

Cytosine Count

1572481 bp

Genome Length

5817639 bp

Protein-coding Genes

5224 genes

Non-Coding Genes

369 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter substrate-binding proteinY71_RS01490Not AvailablePositive319279 - 32038238856.5
aspartate 1-decarboxylase autocleavage activator panmY71_RS01495Not AvailableNegative320564 - 32094714562.3
high-affinity branched-chain amino acid abc transporter substrate-binding protein livkY71_RS01500Not AvailablePositive321375 - 32248439360.9
high-affinity branched-chain amino acid abc transporter permease livhY71_RS01505Not AvailablePositive322539 - 32346532984.3
high-affinity branched-chain amino acid abc transporter permease livmY71_RS01510Not AvailablePositive323462 - 32473946326.2
high-affinity branched-chain amino acid abc transporter atp-binding protein livgY71_RS01515Not AvailablePositive324736 - 32550328309.7
high-affinity branched-chain amino acid abc transporter atp-binding protein livfY71_RS01520Not AvailablePositive325505 - 32621826161.8
sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpbY71_RS01525Not AvailablePositive326584 - 32790048321.2
sn-glycerol-3-phosphate abc transporter permease ugpaY71_RS01530Not AvailablePositive328002 - 32888933199.7
sn-glycerol-3-phosphate abc transporter permease ugpeY71_RS01535Not AvailablePositive328886 - 32973131447.6

Displaying genes 591 – 600 of 5593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.