Pseudomonas songnenensis str. L103

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas songnenensis str. L103 is characterized by having a single replicon, which is a significant feature in understanding its genomic structure and adaptability. The strain is cataloged under the accession number RWYU00000000.2, providing a reference point for further genomic studies and comparisons with related species within the Pseudomonas genus. Pseudomonas species are well-known for their metabolic diversity and environmental versatility, often thriving in various ecological niches. This specific strain, like others in the Pseudomonas lineage, may possess unique biochemical pathways that allow it to utilize a range of organic compounds as carbon and energy sources. Such metabolic capabilities could play a vital role in bioremediation processes, enabling the degradation of pollutants in contaminated environments. The presence of a single replicon in Pseudomonas songnenensis str. L103 suggests a streamlined genomic organization that might enhance its adaptability and survival in fluctuating conditions. This simplicity could facilitate efficient replication and expression of essential genes, contributing to its ecological success. Understanding the traits of this strain may provide insights into its role within microbial communities, especially in environments where Pseudomonas species are prevalent. In summary, Pseudomonas songnenensis str. L103 exhibits a unique genomic trait with its single replicon, providing a foundation for exploring its ecological roles and potential applications in bioremediation and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas songnenensis
StrainL103

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas songnenensis str. L103
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmarine biofouling-material; marine-biofouling material
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas songnenensis str. L103


Gene Summary

Adenine Count

903162 bp

Thymine Count

875767 bp

Guanine Count

1476443 bp

Cytosine Count

1530053 bp

Genome Length

4786411 bp

Protein-coding Genes

4341 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
maoc family dehydrataseEJA06_020480Not AvailablePositive4315761 - 431623117167.7
pullulanase-type alpha-1,6-glucosidaseEJA06_020485Not AvailablePositive4316451 - 4319570114995.0
alpha-ketoglutarate-dependent dioxygenase alkbEJA06_020490Not AvailableNegative4320151 - 432076823148.5
aspartate-semialdehyde dehydrogenaseEJA06_020495Not AvailableNegative4320770 - 432106611139.0
rna polymerase-associated protein rapaEJA06_020500Not AvailablePositive4321218 - 4324067106337.0
chad domain-containing proteinEJA06_020505Not AvailableNegative4324208 - 432511634623.7
hsp70 family proteinEJA06_020510Not AvailableNegative4325236 - 432650146339.3
mfs transporterEJA06_020515Not AvailableNegative4326647 - 432799348400.1
hydroxypyruvate isomeraseEJA06_020520Not AvailableNegative4328115 - 432889728246.0
nad(p)-dependent oxidoreductaseEJA06_020525Not AvailableNegative4328894 - 432978130945.9

Displaying genes 4061 – 4070 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.