Crinalium epipsammum PCC 9333

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Gomontiellales

Family

Gomontiellaceae

Genus

Crinalium

Description

Crinalium epipsammum PCC 9333 is characterized by having five distinct replicons. This trait is significant as it may influence the organism's genetic diversity and adaptability. The strain is represented in several genomic accessions, specifically NC_019734.1, NC_019736.1, NC_019737.1, NC_019755.1, and NC_019756.1. These accessions provide a comprehensive view of its genomic structure and potential functional attributes. The presence of multiple replicons in Crinalium epipsammum PCC 9333 suggests a complex organization of its genetic material. This may play a role in the regulation of gene expression and the maintenance of genomic stability. Additionally, the variety of accessions indicates that this organism may have been the subject of several studies, which could contribute to our understanding of its ecological role and physiological characteristics. From an ecological perspective, Crinalium epipsammum PCC 9333 is likely adapted to specific environments, potentially influencing sedimentary ecosystems. Its ability to thrive in such habitats may reflect its interactions with other microorganisms and its role in nutrient cycling within these ecosystems. Understanding the genomic traits of Crinalium epipsammum PCC 9333 can provide insights into its ecological functions and the dynamics of microbial communities in sandy environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderGomontiellales
FamilyGomontiellaceae
GenusCrinalium
SpeciesCrinalium epipsammum
StrainPCC 9333

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Crinalium epipsammum PCC 9333 plasmid pCRI9333.06, complete

Gene Summary

Adenine Count

9016 bp

Thymine Count

9021 bp

Guanine Count

5648 bp

Cytosine Count

5807 bp

Genome Length

29492 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dde-type integrase/transposase/recombinaseCRI9333_RS28660Not AvailableNegative26809 - 2721515271.5
relaxase/mobilization nuclease domain-containing proteinCRI9333_RS25350Not AvailableNegative27382 - 30546118824.0
plasmid mobilization proteinCRI9333_RS24185Not AvailableNegative30539 - 3098516990.2
hypothetical proteinCRI9333_RS24190Not AvailablePositive31432 - 3184215205.2
parm/stba family proteinCRI9333_RS24195Not AvailablePositive31915 - 3305141642.1
type ii toxin-antitoxin system rele family toxinCRI9333_RS24200Not AvailableNegative33448 - 3377412308.9
hypothetical proteinCRI9333_RS24205Not AvailableNegative33779 - 340339426.17
hypothetical proteinCRI9333_RS24210Not AvailableNegative34213 - 3485424437.9
duf3987 domain-containing proteinCRI9333_RS24215Not AvailableNegative35038 - 38337123197.0
hypothetical proteinCRI9333_RS24220Not AvailableNegative38331 - 385227044.74

Displaying genes 51 – 60 of 158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.