Fibrella aestuarina BUZ 2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Fibrella

Description

Fibrella aestuarina BUZ 2 is a Gram-negative, rod-shaped bacterium characterized by its optimal growth temperature of 29.0°C. This organism, belonging to the diverse group of bacteria typically found in estuarine environments, exhibits the morphological characteristics commonly associated with its genus. The Gram-negative classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in fluctuating salinity and temperature conditions often found in estuaries. The optimal temperature of 29.0°C suggests that Fibrella aestuarina BUZ 2 is well-suited for growth in warm environments, potentially reflecting its ecological niche within coastal ecosystems where temperatures can vary significantly. Such a thermal preference may influence its metabolic activities and interactions with surrounding microbial communities. Fibrella aestuarina BUZ 2's rod shape could also play a role in its motility and nutrient acquisition strategies, which are crucial for survival in nutrient-variable habitats. The organism's adaptation to estuarine conditions underscores its potential role in biogeochemical cycles, particularly in organic matter decomposition and nutrient recycling. Understanding the physiological traits of Fibrella aestuarina BUZ 2 can provide insights into its ecological functions, particularly in the context of microbial community dynamics and environmental resilience in estuarine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusFibrella
SpeciesFibrella aestuarina
StrainBUZ 2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrella aestuarina BUZ 2


Gene Summary

Adenine Count

1466588 bp

Thymine Count

1475242 bp

Guanine Count

1913667 bp

Cytosine Count

1911842 bp

Genome Length

6775444 bp

Protein-coding Genes

5574 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+4826674 - 4826688Not Available
IntegraseFAES_RS19880Not Available-4841255 - 484270356401.3
helix-turn-helix transcriptional regulatorFAES_RS19885Not Available-4842713 - 484375638833.8
hypothetical proteinFAES_RS19890Not Available+4843900 - 484418410696.1
hypothetical proteinFAES_RS19895Not Available+4844148 - 484459416356.1
hypothetical proteinFAES_RS19900Not Available+4844741 - 484509713758.6
hypothetical proteinFAES_RS19905Not Available+4845082 - 484554317442.8
hypothetical proteinFAES_RS19910Not Available+4845646 - 484675241220.7
hypothetical proteinFAES_RS19915Not Available+4846796 - 484770733819.5
NucleaseFAES_RS30160Not Available+4847927 - 484837917078.7

Displaying genes 1 – 10 of 5812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

210 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 210 metabolites